Single cell services

Unravel Complex Biology Using our Single Cell Sequencing Service and Single Cell Genomic Analysis Solutions

The Power of Single Cell Sequencing

Generate Insights at a Cellular Level

Cells are fundamental units of all living organisms. The advent of single cell DNA sequencing technologies has revolutionized our understanding of the various cell types associated with different tissues. Access to single-cell resolution has enabled significant insights into disease pathology including immune cell infiltration in several cancer types and its consequence on therapeutic outcomes. MedGenome is a 10X certified single cell sequencing service provider that offers end-to-end solutions for single cell analysis. We also developed a suite of bioinformatics tools for the analysis, interpretation and visualization of single cell sequencing data including the identification of heavy and light chain pairs following BCR and TCR sequencing.

Our optimized workflows support processing of fresh or frozen cell suspensions, isolated cells and methanol fixed cells.

Single Cell Sequencing Services

Our Comprehensive Suite of Single Cell Solutions Has You Covered

Gene expression
Gene expression
  • Explore cellular heterogeneity using 3' or 5' gene expression libraries for biomarker discovery and more.
Single cell immune profiling
Single cell immune profiling
  • Discover full length paired sequences for T and B cells repertoire analysis.
  • Simultaneously measure gene expression and immune repertoires combined with cell surface protein data to look at functional states and subsets of immune cells.
Multiome profiling
Multiome profiling
  • Combine gene expression with cell surface protein expression data for a multiomic view of your sample of interest.
  • Uncover gene regulatory programs by assaying the epigenome and gene expression simultaneously.

As an early adopter of single cell genomic sequencing, MedGenome supports your research needs from experimental design to data analysis, including selection of the appropriate single cell workflow. We have experience processing complex sample types that vary in quality and input quantity while ensuring fast turnaround times and data accuracy. Our analysis offerings include custom visualizations, bespoke workflows, external data integration and support for publication of data.

Contact us

Single Cell Sequencing Analysis

Comprehensive Data Analysis and Interactive Visualization Powered by MAnGO

Visualize your data through MAnGO (MedGenome Analytics for Genomics), our proprietary analysis platform. This single cell analysis platform uses state-of-the-art analysis and visualization tools. Each report contains a comprehensive summary of key analysis findings with interactive plots and tables. Our reports also allow users to visualize the analysis results including UMAP plots of cell clustering, differential gene expression, pathway enrichment, RNA velocity & lineage analysis, and cell-cell communication analysis.

Our bioinformatics services include:

  • Streamlined on-premise and cloud-native analysis workflows for fast & scalable single cell sequencing protocol & analysis.
  • Customized interactive analysis reports.
  • Publication-ready figures.
  • Data interpretation with support from MedGenome's team of PhD-level experts.

Customized Reports That Fit For Your Exact Requirement

Comprehensive reports
Comprehensive reports
Advanced QC metrics
Advanced QC metrics
Digital gene expression and heatmap visualization
Digital gene expression and heatmap visualization
Interactive tSNE plots with cell type and cluster information
Interactive tSNE plots with cell type and cluster information

Single Cell Sequencing Workflow

Workflow for Sample Processing and Selection of Single Cell Genomic Sequencing Applications at Medgenome

Fresh/cryopreserved Samples with Viable Cells

Fresh/cryopreserved samples with viable cells

Fixed tissues/cells/nuclei including FFPE

Fixed tissues/cells/nuclei including FFPE

Service highlights

The Medgenome Advantage

End-to-end solutions

for sample QC, viability assessment, single cell library preparation, sequencing and analysis.

Custom analytics

for your bioinformatics and data interpretation needs.

Expert team of biologists

available for consultation.

Resources

White papers and technical resources

Resource Video
Video
Single Cell Report Walkthrough
Whitepaper
Whitepaper
MedGenome's versatile single-cell solutions: advancing multiome analysis across diverse sample types

Services

Other Services You’ll Be Interested In

How To Order

Starting a Project with MedGenome

MedGenome's customer portal allows for easy sample submission and sample tracking during lab processing. Using our portal ensures data QC, raw data and interactive analysis reports are delivered securely.

Our process is simple

Request a quote Request a quote
We create your project file We create your project
Upload sample details Upload sample details
Submit documents and ship samples Submit documents and ship samples
We process and analyze your samples We process and analyze your samples
Your data is delivered to you Your data is delivered to you

Blogs

Read Our Latest Blogs

Single-Cell Sequencing: Applications, Methods, and Insights

Single-cell sequencing offers unprecedented resolution for analyzing the unique molecular signatures of individual cells. By deconstructing the cellular landscape, it reveals hidden cell populations, tracks how cells differentiate, and identifies disease biomarkers. By dissecting the genomic, transcriptomic, and epigenetic landscape of single cells, researchers can now gain a deeper understanding of complex biological processes, disease mechanisms, and how patients respond to treatments. This method is essential for both basic and clinical research for unlocking the mysteries of cellular complexity and dynamic biological processes.

Introduction to Single Cell Sequencing – Cite-Seq – Series 3

Cite-Seq, short for Cellular Indexing of Transcriptomes and Epitopes by sequencing, is a powerful technology that has revolutionized single-cell sequencing. With its ability to analyze transcriptomes and protein expression at a single-cell level, Cite-Seq has the potential to greatly advance our understanding of cellular heterogeneity and function in biological systems. In this article, we will discuss the workings of Cite-Seq, its current and potential applications in various fields of research, and its limitations.

From Single Cells to Spatial Landscapes: Unraveling Gene Expression with 10x Flex and Visium

Single-cell RNA sequencing (scRNA-seq) is a powerful method that is widely used in biomedical research. It is extensively used to determine cell composition of complex tissues, identify rare cell types, map heterogeneity at single cell level and identify paired, full-length immunoglobulin sequence and T-cell receptor α/β. Advancements in high-throughput single-cell RNA sequencing technologies, in combination with powerful computational tools, has made scRNA-seq a widely used technology

News

Featured articles

Dr Felix Olale

NEWS

MedGenome Appoints Industry Veterans Felix Olale, M.D., Ph.D., as CEO and Jennifer Rose as CCO to Lead U.S. Expansion
PacBio Revio full-service capability

NEWS

MedGenome enhances omics insights with in-house PacBio Revio full-service capability
Grant Winner Dr. Lauren Esposito

NEWS

MedGenome announces de novo Genome Assembly and Annotation Grant winners for 2024
Foster City Award

NEWS

MedGenome Inc., honored with the Best of Foster City Award six times in a row
Martin Dewhurst MedGenome

NEWS

MedGenome appoints Martin Dewhurst as Chairman of Advisory Board
10X Certified MedGenome

NEWS

MedGenome achieves 10x Genomics Certified Service provider qualification for single cell sequencing
MedGenome Pharma Partneship

NEWS

MedGenome ties-up with Emmes to bridge gaps in rare diseases
MedGenome Grant

NEWS

MedGenome, in collaboration with PacBio, announces a de novo genome assembly and annotation grant
Biomarker Discovery Research

NEWS

Gallbladder cancer vaccine candidates identified

CONTACT US

Work with the multiomics specialists

Fields marked * are mandatory

©2025 MedGenome | All rights reserved | Terms & conditions | Privacy policy
Request a quote